Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Mir698-201ENSMUST00000102164 109 ntBASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Fndc4Q3TR08 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Syt7-205ENSMUST00000224135 1557 ntBASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Gm4804-201ENSMUST00000182234 999 ntBASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Mir7684-201ENSMUST00000183858 60 ntBASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Gm5425-201ENSMUST00000214125 459 ntBASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Fndc4Q3TR08 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Fndc4Q3TR08 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms