Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Mir874-201ENSMUST00000104769 76 ntBASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Gm29741-201ENSMUST00000192667 421 ntBASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ccbe1Q3MI99 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Gm9727-201ENSMUST00000161387 555 ntBASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ccbe1Q3MI99 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Anxa6-202ENSMUST00000108883 2489 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ccbe1Q3MI99 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms