Protein–RNA interactions for Protein: Q1W617

Shroom4, Protein Shroom4, mousemouse

Predictions only

Length 1,475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom4Q1W617 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC20.43■□□□□ 0.86
Shroom4Q1W617 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Shroom4Q1W617 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom4Q1W617 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom4Q1W617 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom4Q1W617 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Shroom4Q1W617 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom4Q1W617 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom4Q1W617 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Shroom4Q1W617 Gm15515-201ENSMUST00000117827 822 ntBASIC20.43■□□□□ 0.86
Shroom4Q1W617 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC20.43■□□□□ 0.86
Shroom4Q1W617 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC20.43■□□□□ 0.86
Shroom4Q1W617 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC20.43■□□□□ 0.86
Shroom4Q1W617 AY036118-201ENSMUST00000200021 923 ntBASIC20.43■□□□□ 0.86
Shroom4Q1W617 AC107638.1-201ENSMUST00000213690 1061 ntBASIC20.43■□□□□ 0.86
Shroom4Q1W617 Gm21027-201ENSMUST00000219300 1236 ntBASIC20.43■□□□□ 0.86
Shroom4Q1W617 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Shroom4Q1W617 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Shroom4Q1W617 CT025610.1-201ENSMUST00000224552 1786 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm45242-201ENSMUST00000210666 2129 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm12616-201ENSMUST00000118594 382 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm13461-201ENSMUST00000120980 662 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm23119-201ENSMUST00000158610 140 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm12624-201ENSMUST00000177615 382 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm12621-201ENSMUST00000177760 382 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm12615-201ENSMUST00000177970 382 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm12622-201ENSMUST00000177975 382 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm12627-201ENSMUST00000178412 382 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm12625-201ENSMUST00000179122 382 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm12614-201ENSMUST00000179586 382 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm12613-201ENSMUST00000180323 382 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Gm9211-201ENSMUST00000182882 975 ntBASIC20.42■□□□□ 0.86
Shroom4Q1W617 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Shroom4Q1W617 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom4Q1W617 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC20.41■□□□□ 0.86
Shroom4Q1W617 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC20.41■□□□□ 0.86
Shroom4Q1W617 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Gm44126-201ENSMUST00000204831 514 ntBASIC20.4■□□□□ 0.86
Shroom4Q1W617 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Shroom4Q1W617 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom4Q1W617 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
Shroom4Q1W617 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shroom4Q1W617 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shroom4Q1W617 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shroom4Q1W617 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC20.39■□□□□ 0.86
Shroom4Q1W617 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC20.39■□□□□ 0.86
Shroom4Q1W617 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shroom4Q1W617 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms