Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Gm10434-201ENSMUST00000101158 471 ntBASIC12.62□□□□□ -0.39
Hoxc4Q08624 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Gm13342-201ENSMUST00000121055 207 ntBASIC12.62□□□□□ -0.39
Hoxc4Q08624 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.62□□□□□ -0.39
Hoxc4Q08624 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.62□□□□□ -0.39
Hoxc4Q08624 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.62□□□□□ -0.39
Hoxc4Q08624 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hoxc4Q08624 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.61□□□□□ -0.39
Hoxc4Q08624 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Gm23363-201ENSMUST00000175024 79 ntBASIC12.61□□□□□ -0.39
Hoxc4Q08624 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.61□□□□□ -0.39
Hoxc4Q08624 Gm43822-201ENSMUST00000200285 476 ntBASIC12.61□□□□□ -0.39
Hoxc4Q08624 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.61□□□□□ -0.39
Hoxc4Q08624 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Hoxc4Q08624 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.6□□□□□ -0.39
Hoxc4Q08624 Gm4986-201ENSMUST00000119731 549 ntBASIC12.6□□□□□ -0.39
Hoxc4Q08624 Gm12502-201ENSMUST00000120197 444 ntBASIC12.6□□□□□ -0.39
Hoxc4Q08624 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Hoxc4Q08624 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms