Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col9a2Q07643 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col9a2Q07643 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.25□□□□□ -0.13
Col9a2Q07643 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Gm16570-201ENSMUST00000161951 436 ntBASIC14.25□□□□□ -0.13
Col9a2Q07643 Gm22121-201ENSMUST00000175148 54 ntBASIC14.25□□□□□ -0.13
Col9a2Q07643 Mir7221-201ENSMUST00000184009 72 ntBASIC14.25□□□□□ -0.13
Col9a2Q07643 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col9a2Q07643 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.25□□□□□ -0.13
Col9a2Q07643 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col9a2Q07643 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Col9a2Q07643 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Col9a2Q07643 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col9a2Q07643 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col9a2Q07643 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.24□□□□□ -0.13
Col9a2Q07643 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.24□□□□□ -0.13
Col9a2Q07643 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Col9a2Q07643 Gm6023-201ENSMUST00000118217 606 ntBASIC14.24□□□□□ -0.13
Col9a2Q07643 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.24□□□□□ -0.13
Col9a2Q07643 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.24□□□□□ -0.13
Col9a2Q07643 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Col9a2Q07643 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Col9a2Q07643 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Col9a2Q07643 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Gm13342-201ENSMUST00000121055 207 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Gm16379-201ENSMUST00000161469 348 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Gm8762-201ENSMUST00000193486 339 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Gm37259-201ENSMUST00000193903 849 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Gm37466-201ENSMUST00000195692 652 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Gm7783-201ENSMUST00000204795 781 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Col9a2Q07643 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.23□□□□□ -0.13
Col9a2Q07643 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Col9a2Q07643 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Col9a2Q07643 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col9a2Q07643 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms