Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC19.75■□□□□ 0.75
Col17a1Q07563 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Col17a1Q07563 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.75■□□□□ 0.75
Col17a1Q07563 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC19.75■□□□□ 0.75
Col17a1Q07563 Gm18626-201ENSMUST00000221512 1409 ntBASIC19.75■□□□□ 0.75
Col17a1Q07563 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col17a1Q07563 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Gm12314-201ENSMUST00000118104 538 ntBASIC19.74■□□□□ 0.75
Col17a1Q07563 Gm13315-201ENSMUST00000120376 991 ntBASIC19.74■□□□□ 0.75
Col17a1Q07563 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC19.74■□□□□ 0.75
Col17a1Q07563 Gm17796-201ENSMUST00000189015 1213 ntBASIC19.74■□□□□ 0.75
Col17a1Q07563 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC19.74■□□□□ 0.75
Col17a1Q07563 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Col17a1Q07563 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC19.74■□□□□ 0.75
Col17a1Q07563 Gm5455-201ENSMUST00000058710 715 ntBASIC19.74■□□□□ 0.75
Col17a1Q07563 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.74■□□□□ 0.75
Col17a1Q07563 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.74■□□□□ 0.75
Col17a1Q07563 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC19.74■□□□□ 0.75
Col17a1Q07563 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col17a1Q07563 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col17a1Q07563 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Defa-ps17-201ENSMUST00000121849 171 ntBASIC19.73■□□□□ 0.75
Col17a1Q07563 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC19.73■□□□□ 0.75
Col17a1Q07563 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Gm24398-201ENSMUST00000157870 109 ntBASIC19.73■□□□□ 0.75
Col17a1Q07563 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Gm42937-201ENSMUST00000197360 752 ntBASIC19.73■□□□□ 0.75
Col17a1Q07563 Gm44270-201ENSMUST00000203084 1234 ntBASIC19.73■□□□□ 0.75
Col17a1Q07563 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col17a1Q07563 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Gm16380-201ENSMUST00000077997 478 ntBASIC19.73■□□□□ 0.75
Col17a1Q07563 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Gm43697-201ENSMUST00000199637 2581 ntBASIC19.73■□□□□ 0.75
Col17a1Q07563 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col17a1Q07563 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC19.73■□□□□ 0.75
Col17a1Q07563 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col17a1Q07563 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC19.72■□□□□ 0.75
Col17a1Q07563 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.72■□□□□ 0.75
Col17a1Q07563 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC19.72■□□□□ 0.75
Col17a1Q07563 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col17a1Q07563 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col17a1Q07563 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col17a1Q07563 AC164107.1-201ENSMUST00000227730 2161 ntBASIC19.72■□□□□ 0.75
Col17a1Q07563 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col17a1Q07563 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Col17a1Q07563 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.72■□□□□ 0.75
Col17a1Q07563 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col17a1Q07563 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col17a1Q07563 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Col17a1Q07563 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.72■□□□□ 0.75
Col17a1Q07563 Gm12337-201ENSMUST00000119634 400 ntBASIC19.72■□□□□ 0.75
Col17a1Q07563 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Col17a1Q07563 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col17a1Q07563 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Col17a1Q07563 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms