Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm14350-201ENSMUST00000116642 640 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm17794-201ENSMUST00000220252 955 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.16□□□□□ -0.46
Col10a1Q05306 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col10a1Q05306 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col10a1Q05306 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Col10a1Q05306 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col10a1Q05306 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Col10a1Q05306 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Col10a1Q05306 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.15□□□□□ -0.46
Col10a1Q05306 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col10a1Q05306 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Col10a1Q05306 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.15□□□□□ -0.46
Col10a1Q05306 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.15□□□□□ -0.46
Col10a1Q05306 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.15□□□□□ -0.46
Col10a1Q05306 Gm5035-201ENSMUST00000215581 927 ntBASIC12.15□□□□□ -0.46
Col10a1Q05306 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Col10a1Q05306 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.15□□□□□ -0.46
Col10a1Q05306 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.15□□□□□ -0.46
Col10a1Q05306 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.15□□□□□ -0.46
Col10a1Q05306 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Col10a1Q05306 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col10a1Q05306 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col10a1Q05306 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Col10a1Q05306 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Col10a1Q05306 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.14□□□□□ -0.47
Col10a1Q05306 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Col10a1Q05306 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Col10a1Q05306 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col10a1Q05306 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Col10a1Q05306 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms