Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.39□□□□□ -0.27
Gabpb1Q00420 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.39□□□□□ -0.27
Gabpb1Q00420 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Gabpb1Q00420 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Gabpb1Q00420 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.38□□□□□ -0.27
Gabpb1Q00420 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.38□□□□□ -0.27
Gabpb1Q00420 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.38□□□□□ -0.27
Gabpb1Q00420 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.38□□□□□ -0.27
Gabpb1Q00420 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Gabpb1Q00420 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.38□□□□□ -0.27
Gabpb1Q00420 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.38□□□□□ -0.27
Gabpb1Q00420 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Gabpb1Q00420 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.37□□□□□ -0.27
Gabpb1Q00420 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.37□□□□□ -0.27
Gabpb1Q00420 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.37□□□□□ -0.27
Gabpb1Q00420 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Gabpb1Q00420 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Gabpb1Q00420 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms