Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Gm45550-201ENSMUST00000209380 946 ntBASIC12.38□□□□□ -0.43
Brca2P97929 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.38□□□□□ -0.43
Brca2P97929 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.38□□□□□ -0.43
Brca2P97929 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Brca2P97929 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Brca2P97929 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.38□□□□□ -0.43
Brca2P97929 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Brca2P97929 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.37□□□□□ -0.43
Brca2P97929 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Brca2P97929 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC12.37□□□□□ -0.43
Brca2P97929 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Brca2P97929 Gm5340-201ENSMUST00000203733 880 ntBASIC12.37□□□□□ -0.43
Brca2P97929 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.37□□□□□ -0.43
Brca2P97929 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Brca2P97929 Gm25201-201ENSMUST00000083093 170 ntBASIC12.37□□□□□ -0.43
Brca2P97929 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Brca2P97929 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.37□□□□□ -0.43
Brca2P97929 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Brca2P97929 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.37□□□□□ -0.43
Brca2P97929 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.37□□□□□ -0.43
Brca2P97929 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.37□□□□□ -0.43
Brca2P97929 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Snora73b-201ENSMUST00000083419 205 ntBASIC12.37□□□□□ -0.43
Brca2P97929 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Brca2P97929 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.37□□□□□ -0.43
Brca2P97929 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.37□□□□□ -0.43
Brca2P97929 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Brca2P97929 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.37□□□□□ -0.43
Brca2P97929 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Gm22058-201ENSMUST00000083393 310 ntBASIC12.37□□□□□ -0.43
Brca2P97929 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Brca2P97929 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Brca2P97929 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Brca2P97929 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Gm12218-201ENSMUST00000117666 399 ntBASIC12.36□□□□□ -0.43
Brca2P97929 Gm14034-201ENSMUST00000120147 551 ntBASIC12.36□□□□□ -0.43
Brca2P97929 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Gm38092-201ENSMUST00000195600 653 ntBASIC12.36□□□□□ -0.43
Brca2P97929 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.36□□□□□ -0.43
Brca2P97929 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.36□□□□□ -0.43
Brca2P97929 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
Brca2P97929 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Brca2P97929 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Gm15036-201ENSMUST00000118880 400 ntBASIC12.36□□□□□ -0.43
Brca2P97929 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Gm5904-201ENSMUST00000210286 865 ntBASIC12.36□□□□□ -0.43
Brca2P97929 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.36□□□□□ -0.43
Brca2P97929 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Brca2P97929 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms