Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Gm6447-201ENSMUST00000118905 835 ntBASIC12.16□□□□□ -0.46
Cacna1aP97445 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Gm44100-201ENSMUST00000204329 436 ntBASIC12.16□□□□□ -0.46
Cacna1aP97445 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.16□□□□□ -0.46
Cacna1aP97445 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cacna1aP97445 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Gm28450-201ENSMUST00000187349 638 ntBASIC12.16□□□□□ -0.46
Cacna1aP97445 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.16□□□□□ -0.46
Cacna1aP97445 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.16□□□□□ -0.46
Cacna1aP97445 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.16□□□□□ -0.46
Cacna1aP97445 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.16□□□□□ -0.46
Cacna1aP97445 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.16□□□□□ -0.46
Cacna1aP97445 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cacna1aP97445 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cacna1aP97445 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.16□□□□□ -0.46
Cacna1aP97445 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
Cacna1aP97445 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.15□□□□□ -0.46
Cacna1aP97445 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Gm11597-201ENSMUST00000121423 964 ntBASIC12.15□□□□□ -0.46
Cacna1aP97445 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.15□□□□□ -0.46
Cacna1aP97445 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Cacna1aP97445 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cacna1aP97445 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.15□□□□□ -0.46
Cacna1aP97445 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cacna1aP97445 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cacna1aP97445 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cacna1aP97445 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Cacna1aP97445 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cacna1aP97445 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cacna1aP97445 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.15□□□□□ -0.47
Cacna1aP97445 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Cacna1aP97445 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cacna1aP97445 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Cacna1aP97445 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.14□□□□□ -0.47
Cacna1aP97445 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cacna1aP97445 Gm38317-201ENSMUST00000195564 343 ntBASIC12.14□□□□□ -0.47
Cacna1aP97445 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.14□□□□□ -0.47
Cacna1aP97445 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Cacna1aP97445 Gm10752-201ENSMUST00000218348 729 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms