Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trim43bP86448 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trim43bP86448 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim43bP86448 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.57□□□□□ -0.24
Trim43bP86448 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Trim43bP86448 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim43bP86448 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.57□□□□□ -0.24
Trim43bP86448 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Gm5354-201ENSMUST00000182417 973 ntBASIC13.57□□□□□ -0.24
Trim43bP86448 Gm5745-201ENSMUST00000183748 313 ntBASIC13.57□□□□□ -0.24
Trim43bP86448 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.57□□□□□ -0.24
Trim43bP86448 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.57□□□□□ -0.24
Trim43bP86448 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.57□□□□□ -0.24
Trim43bP86448 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim43bP86448 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim43bP86448 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim43bP86448 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trim43bP86448 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim43bP86448 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.57□□□□□ -0.24
Trim43bP86448 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trim43bP86448 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trim43bP86448 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trim43bP86448 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.56□□□□□ -0.24
Trim43bP86448 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim43bP86448 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim43bP86448 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim43bP86448 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.56□□□□□ -0.24
Trim43bP86448 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim43bP86448 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Gm45668-201ENSMUST00000211271 493 ntBASIC13.56□□□□□ -0.24
Trim43bP86448 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.56□□□□□ -0.24
Trim43bP86448 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim43bP86448 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Trim43bP86448 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trim43bP86448 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim43bP86448 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim43bP86448 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim43bP86448 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trim43bP86448 Gm6912-201ENSMUST00000117218 544 ntBASIC13.55□□□□□ -0.24
Trim43bP86448 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.55□□□□□ -0.24
Trim43bP86448 Gm11424-201ENSMUST00000121929 829 ntBASIC13.55□□□□□ -0.24
Trim43bP86448 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim43bP86448 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim43bP86448 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim43bP86448 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.55□□□□□ -0.24
Trim43bP86448 Gm37917-201ENSMUST00000194711 392 ntBASIC13.55□□□□□ -0.24
Trim43bP86448 Gm9794-201ENSMUST00000202370 423 ntBASIC13.55□□□□□ -0.24
Trim43bP86448 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.55□□□□□ -0.24
Trim43bP86448 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim43bP86448 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim43bP86448 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim43bP86448 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms