Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Six5P70178 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Six5P70178 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Six5P70178 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Six5P70178 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.34□□□□□ -0.43
Six5P70178 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.34□□□□□ -0.43
Six5P70178 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Six5P70178 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Gm12490-201ENSMUST00000120255 560 ntBASIC12.34□□□□□ -0.43
Six5P70178 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.34□□□□□ -0.43
Six5P70178 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.34□□□□□ -0.43
Six5P70178 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.34□□□□□ -0.43
Six5P70178 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.34□□□□□ -0.43
Six5P70178 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.34□□□□□ -0.43
Six5P70178 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.34□□□□□ -0.43
Six5P70178 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.34□□□□□ -0.43
Six5P70178 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Six5P70178 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.34□□□□□ -0.43
Six5P70178 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Six5P70178 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
Six5P70178 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.33□□□□□ -0.44
Six5P70178 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.33□□□□□ -0.44
Six5P70178 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Six5P70178 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Six5P70178 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.33□□□□□ -0.44
Six5P70178 Gm15806-201ENSMUST00000120696 955 ntBASIC12.33□□□□□ -0.44
Six5P70178 Mir1894-201ENSMUST00000122802 81 ntBASIC12.33□□□□□ -0.44
Six5P70178 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.33□□□□□ -0.44
Six5P70178 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.33□□□□□ -0.44
Six5P70178 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.33□□□□□ -0.44
Six5P70178 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Six5P70178 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Six5P70178 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Six5P70178 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Six5P70178 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Six5P70178 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Six5P70178 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.32□□□□□ -0.44
Six5P70178 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.32□□□□□ -0.44
Six5P70178 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Six5P70178 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms