Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfn1P62962 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Pfn1P62962 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Pfn1P62962 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Pfn1P62962 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.21□□□□□ -0.77
Pfn1P62962 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.21□□□□□ -0.77
Pfn1P62962 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Pfn1P62962 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Pfn1P62962 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.77
Pfn1P62962 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.77
Pfn1P62962 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Pfn1P62962 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Pfn1P62962 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Pfn1P62962 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC10.21□□□□□ -0.77
Pfn1P62962 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC10.21□□□□□ -0.77
Pfn1P62962 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC10.21□□□□□ -0.77
Pfn1P62962 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.21□□□□□ -0.77
Pfn1P62962 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.21□□□□□ -0.77
Pfn1P62962 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.21□□□□□ -0.77
Pfn1P62962 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.21□□□□□ -0.77
Pfn1P62962 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 Gm20553-201ENSMUST00000204205 844 ntBASIC10.21□□□□□ -0.77
Pfn1P62962 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC10.21□□□□□ -0.77
Pfn1P62962 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Pfn1P62962 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Pfn1P62962 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.21□□□□□ -0.78
Pfn1P62962 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.21□□□□□ -0.78
Pfn1P62962 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.21□□□□□ -0.78
Pfn1P62962 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC10.21□□□□□ -0.78
Pfn1P62962 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.21□□□□□ -0.78
Pfn1P62962 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Pfn1P62962 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.21□□□□□ -0.78
Pfn1P62962 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.2□□□□□ -0.78
Pfn1P62962 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Pfn1P62962 Gm6539-201ENSMUST00000119157 1064 ntBASIC10.2□□□□□ -0.78
Pfn1P62962 Gm1401-201ENSMUST00000122048 772 ntBASIC10.2□□□□□ -0.78
Pfn1P62962 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.2□□□□□ -0.78
Pfn1P62962 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Mir3113-201ENSMUST00000175478 76 ntBASIC10.2□□□□□ -0.78
Pfn1P62962 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Pfn1P62962 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.2□□□□□ -0.78
Pfn1P62962 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.2□□□□□ -0.78
Pfn1P62962 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.2□□□□□ -0.78
Pfn1P62962 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Pfn1P62962 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Pfn1P62962 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Pfn1P62962 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms