Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nphp4P59240 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Nphp4P59240 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC17.65■□□□□ 0.42
Nphp4P59240 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nphp4P59240 Gm14109-201ENSMUST00000118814 309 ntBASIC17.65■□□□□ 0.42
Nphp4P59240 Gm4760-201ENSMUST00000119663 1030 ntBASIC17.65■□□□□ 0.42
Nphp4P59240 Gm13665-201ENSMUST00000120830 528 ntBASIC17.65■□□□□ 0.42
Nphp4P59240 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC17.65■□□□□ 0.42
Nphp4P59240 Gm15547-201ENSMUST00000122152 333 ntBASIC17.65■□□□□ 0.42
Nphp4P59240 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Nphp4P59240 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC17.65■□□□□ 0.42
Nphp4P59240 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Gm5869-201ENSMUST00000200248 1257 ntBASIC17.65■□□□□ 0.42
Nphp4P59240 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nphp4P59240 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC17.65■□□□□ 0.42
Nphp4P59240 AC126253.1-202ENSMUST00000226732 835 ntBASIC17.65■□□□□ 0.42
Nphp4P59240 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Gm30238-201ENSMUST00000195528 2603 ntBASIC17.65■□□□□ 0.42
Nphp4P59240 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nphp4P59240 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Gm44401-201ENSMUST00000204462 2375 ntBASIC17.65■□□□□ 0.42
Nphp4P59240 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.65■□□□□ 0.42
Nphp4P59240 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nphp4P59240 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC17.65■□□□□ 0.42
Nphp4P59240 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nphp4P59240 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nphp4P59240 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC17.65■□□□□ 0.42
Nphp4P59240 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.65■□□□□ 0.42
Nphp4P59240 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Nphp4P59240 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Nphp4P59240 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Nphp4P59240 Gm11930-201ENSMUST00000117788 190 ntBASIC17.64■□□□□ 0.42
Nphp4P59240 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nphp4P59240 Gm13315-201ENSMUST00000120376 991 ntBASIC17.64■□□□□ 0.42
Nphp4P59240 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.64■□□□□ 0.42
Nphp4P59240 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17.64■□□□□ 0.42
Nphp4P59240 AC125209.1-201ENSMUST00000225812 766 ntBASIC17.64■□□□□ 0.42
Nphp4P59240 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nphp4P59240 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nphp4P59240 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nphp4P59240 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nphp4P59240 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC17.64■□□□□ 0.41
Nphp4P59240 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nphp4P59240 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nphp4P59240 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Nphp4P59240 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.64■□□□□ 0.41
Nphp4P59240 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC17.64■□□□□ 0.41
Nphp4P59240 AC113031.8-201ENSMUST00000227856 631 ntBASIC17.64■□□□□ 0.41
Nphp4P59240 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Nphp4P59240 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nphp4P59240 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Nphp4P59240 Gm12997-201ENSMUST00000120207 640 ntBASIC17.63■□□□□ 0.41
Nphp4P59240 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC17.63■□□□□ 0.41
Nphp4P59240 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Gm15276-201ENSMUST00000145953 498 ntBASIC17.63■□□□□ 0.41
Nphp4P59240 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Nphp4P59240 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
Nphp4P59240 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nphp4P59240 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC17.63■□□□□ 0.41
Nphp4P59240 Gm4819-201ENSMUST00000182170 1009 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms