Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nup43P59235 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nup43P59235 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.44□□□□□ -0.42
Nup43P59235 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Gm8213-201ENSMUST00000118191 441 ntBASIC12.44□□□□□ -0.42
Nup43P59235 Gm11803-201ENSMUST00000119966 444 ntBASIC12.44□□□□□ -0.42
Nup43P59235 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.44□□□□□ -0.42
Nup43P59235 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.44□□□□□ -0.42
Nup43P59235 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Gm19931-201ENSMUST00000198920 368 ntBASIC12.44□□□□□ -0.42
Nup43P59235 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.44□□□□□ -0.42
Nup43P59235 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nup43P59235 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.44□□□□□ -0.42
Nup43P59235 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.44□□□□□ -0.42
Nup43P59235 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.44□□□□□ -0.42
Nup43P59235 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Nup43P59235 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Nup43P59235 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Nup43P59235 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.44□□□□□ -0.42
Nup43P59235 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Nup43P59235 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nup43P59235 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Nup43P59235 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Nup43P59235 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Nup43P59235 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.43□□□□□ -0.42
Nup43P59235 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Nup43P59235 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Nup43P59235 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.43□□□□□ -0.42
Nup43P59235 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.43□□□□□ -0.42
Nup43P59235 Gm10156-201ENSMUST00000122364 462 ntBASIC12.43□□□□□ -0.42
Nup43P59235 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.43□□□□□ -0.42
Nup43P59235 Gm8810-201ENSMUST00000172895 754 ntBASIC12.43□□□□□ -0.42
Nup43P59235 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.43□□□□□ -0.42
Nup43P59235 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.43□□□□□ -0.42
Nup43P59235 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Nup43P59235 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.43□□□□□ -0.42
Nup43P59235 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Gm10012-201ENSMUST00000078252 192 ntBASIC12.43□□□□□ -0.42
Nup43P59235 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Nup43P59235 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nup43P59235 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Nup43P59235 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.43□□□□□ -0.42
Nup43P59235 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nup43P59235 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nup43P59235 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup43P59235 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup43P59235 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.42□□□□□ -0.42
Nup43P59235 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup43P59235 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup43P59235 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup43P59235 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup43P59235 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Nup43P59235 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup43P59235 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.42□□□□□ -0.42
Nup43P59235 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup43P59235 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nup43P59235 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nup43P59235 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.42□□□□□ -0.42
Nup43P59235 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.42□□□□□ -0.42
Nup43P59235 Gm27847-201ENSMUST00000183711 107 ntBASIC12.42□□□□□ -0.42
Nup43P59235 Gm27375-201ENSMUST00000183799 107 ntBASIC12.42□□□□□ -0.42
Nup43P59235 Gm8602-201ENSMUST00000184045 607 ntBASIC12.42□□□□□ -0.42
Nup43P59235 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms