Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vps33bP59016 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps33bP59016 Gm39404-201ENSMUST00000216350 313 ntBASIC16.42■□□□□ 0.22
Vps33bP59016 AC166992.1-201ENSMUST00000216356 565 ntBASIC16.42■□□□□ 0.22
Vps33bP59016 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps33bP59016 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC16.42■□□□□ 0.22
Vps33bP59016 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC16.42■□□□□ 0.22
Vps33bP59016 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vps33bP59016 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vps33bP59016 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.41■□□□□ 0.22
Vps33bP59016 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps33bP59016 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vps33bP59016 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Vps33bP59016 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC16.41■□□□□ 0.22
Vps33bP59016 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC16.41■□□□□ 0.22
Vps33bP59016 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.41■□□□□ 0.22
Vps33bP59016 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.41■□□□□ 0.22
Vps33bP59016 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vps33bP59016 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vps33bP59016 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.4■□□□□ 0.22
Vps33bP59016 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.4■□□□□ 0.22
Vps33bP59016 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Vps33bP59016 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Vps33bP59016 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.4■□□□□ 0.22
Vps33bP59016 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.4■□□□□ 0.22
Vps33bP59016 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Mir874-201ENSMUST00000104769 76 ntBASIC16.4■□□□□ 0.22
Vps33bP59016 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC16.4■□□□□ 0.22
Vps33bP59016 Gm12029-201ENSMUST00000120073 832 ntBASIC16.4■□□□□ 0.22
Vps33bP59016 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC16.4■□□□□ 0.22
Vps33bP59016 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC16.4■□□□□ 0.22
Vps33bP59016 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Gm9540-201ENSMUST00000188230 478 ntBASIC16.4■□□□□ 0.22
Vps33bP59016 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC16.4■□□□□ 0.22
Vps33bP59016 Gm18038-201ENSMUST00000197900 485 ntBASIC16.4■□□□□ 0.22
Vps33bP59016 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC16.4■□□□□ 0.22
Vps33bP59016 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC16.4■□□□□ 0.22
Vps33bP59016 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Vps33bP59016 Gm45550-201ENSMUST00000209380 946 ntBASIC16.4■□□□□ 0.22
Vps33bP59016 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vps33bP59016 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Vps33bP59016 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vps33bP59016 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Vps33bP59016 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Vps33bP59016 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps33bP59016 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps33bP59016 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps33bP59016 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms