Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Tpm1P58771 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Tpm1P58771 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC14.69□□□□□ -0.06
Tpm1P58771 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Tpm1P58771 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Tpm1P58771 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.69□□□□□ -0.06
Tpm1P58771 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.69□□□□□ -0.06
Tpm1P58771 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Gm10253-201ENSMUST00000194270 940 ntBASIC14.69□□□□□ -0.06
Tpm1P58771 Gm44335-201ENSMUST00000196879 141 ntBASIC14.69□□□□□ -0.06
Tpm1P58771 Gm44297-201ENSMUST00000198304 141 ntBASIC14.69□□□□□ -0.06
Tpm1P58771 Gm44346-201ENSMUST00000198851 141 ntBASIC14.69□□□□□ -0.06
Tpm1P58771 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.69□□□□□ -0.06
Tpm1P58771 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Tpm1P58771 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Tpm1P58771 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Tpm1P58771 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Tpm1P58771 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Tpm1P58771 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Tpm1P58771 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC14.68□□□□□ -0.06
Tpm1P58771 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.68□□□□□ -0.06
Tpm1P58771 Gm6912-201ENSMUST00000117218 544 ntBASIC14.68□□□□□ -0.06
Tpm1P58771 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Gm43474-201ENSMUST00000196415 774 ntBASIC14.68□□□□□ -0.06
Tpm1P58771 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Tpm1P58771 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Tpm1P58771 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Tpm1P58771 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Tpm1P58771 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Tpm1P58771 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Tpm1P58771 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Tpm1P58771 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Gm25911-201ENSMUST00000157621 56 ntBASIC14.67□□□□□ -0.06
Tpm1P58771 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Tpm1P58771 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.67□□□□□ -0.06
Tpm1P58771 Gm10766-202ENSMUST00000194123 606 ntBASIC14.67□□□□□ -0.06
Tpm1P58771 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms