Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ephb3P54754 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ephb3P54754 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.76□□□□□ -0.21
Ephb3P54754 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.76□□□□□ -0.21
Ephb3P54754 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ephb3P54754 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Gm11331-201ENSMUST00000119764 288 ntBASIC13.76□□□□□ -0.21
Ephb3P54754 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.76□□□□□ -0.21
Ephb3P54754 Gm27023-201ENSMUST00000182372 285 ntBASIC13.76□□□□□ -0.21
Ephb3P54754 Gm28450-201ENSMUST00000187349 638 ntBASIC13.76□□□□□ -0.21
Ephb3P54754 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
Ephb3P54754 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ephb3P54754 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Ephb3P54754 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ephb3P54754 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ephb3P54754 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.75□□□□□ -0.21
Ephb3P54754 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.75□□□□□ -0.21
Ephb3P54754 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ephb3P54754 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.75□□□□□ -0.21
Ephb3P54754 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.75□□□□□ -0.21
Ephb3P54754 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Ephb3P54754 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ephb3P54754 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Ephb3P54754 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Ephb3P54754 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ephb3P54754 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ephb3P54754 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ephb3P54754 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ephb3P54754 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.74□□□□□ -0.21
Ephb3P54754 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ephb3P54754 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ephb3P54754 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.74□□□□□ -0.21
Ephb3P54754 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ephb3P54754 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ephb3P54754 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ephb3P54754 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ephb3P54754 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ephb3P54754 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ephb3P54754 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ephb3P54754 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ephb3P54754 Snord83b-201ENSMUST00000104546 94 ntBASIC13.74□□□□□ -0.21
Ephb3P54754 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ephb3P54754 Gm13875-201ENSMUST00000120162 282 ntBASIC13.74□□□□□ -0.21
Ephb3P54754 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms