Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nub1P54729 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.21□□□□□ -0.13
Nub1P54729 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Nub1P54729 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nub1P54729 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nub1P54729 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nub1P54729 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nub1P54729 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nub1P54729 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Nub1P54729 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nub1P54729 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Nub1P54729 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Nub1P54729 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Nub1P54729 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Nub1P54729 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nub1P54729 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.2□□□□□ -0.14
Nub1P54729 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.2□□□□□ -0.14
Nub1P54729 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.2□□□□□ -0.14
Nub1P54729 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nub1P54729 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Nub1P54729 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Gm6152-201ENSMUST00000151704 340 ntBASIC14.2□□□□□ -0.14
Nub1P54729 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Nub1P54729 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Nub1P54729 Gm7287-201ENSMUST00000205267 602 ntBASIC14.2□□□□□ -0.14
Nub1P54729 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.2□□□□□ -0.14
Nub1P54729 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Nub1P54729 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.2□□□□□ -0.14
Nub1P54729 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.2□□□□□ -0.14
Nub1P54729 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Nub1P54729 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.2□□□□□ -0.14
Nub1P54729 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Nub1P54729 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.19□□□□□ -0.14
Nub1P54729 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.19□□□□□ -0.14
Nub1P54729 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.19□□□□□ -0.14
Nub1P54729 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.19□□□□□ -0.14
Nub1P54729 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nub1P54729 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.19□□□□□ -0.14
Nub1P54729 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.19□□□□□ -0.14
Nub1P54729 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.19□□□□□ -0.14
Nub1P54729 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nub1P54729 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Nub1P54729 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms