Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Atxn1P54254 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atxn1P54254 Grk6-205ENSMUST00000224653 2976 ntBASIC13.08□□□□□ -0.31
Atxn1P54254 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn1P54254 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Atxn1P54254 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Atxn1P54254 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.08□□□□□ -0.32
Atxn1P54254 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.08□□□□□ -0.32
Atxn1P54254 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Gm8959-201ENSMUST00000213150 571 ntBASIC13.08□□□□□ -0.32
Atxn1P54254 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.08□□□□□ -0.32
Atxn1P54254 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 n-R5s195-201ENSMUST00000082891 119 ntBASIC13.08□□□□□ -0.32
Atxn1P54254 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Atxn1P54254 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Atxn1P54254 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Atxn1P54254 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.07□□□□□ -0.32
Atxn1P54254 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.07□□□□□ -0.32
Atxn1P54254 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.07□□□□□ -0.32
Atxn1P54254 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Atxn1P54254 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Atxn1P54254 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Atxn1P54254 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Atxn1P54254 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.07□□□□□ -0.32
Atxn1P54254 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Gm11628-201ENSMUST00000117568 171 ntBASIC13.07□□□□□ -0.32
Atxn1P54254 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.07□□□□□ -0.32
Atxn1P54254 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.07□□□□□ -0.32
Atxn1P54254 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.07□□□□□ -0.32
Atxn1P54254 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.07□□□□□ -0.32
Atxn1P54254 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.07□□□□□ -0.32
Atxn1P54254 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Atxn1P54254 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.07□□□□□ -0.32
Atxn1P54254 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.07□□□□□ -0.32
Atxn1P54254 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.07□□□□□ -0.32
Atxn1P54254 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Atxn1P54254 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Atxn1P54254 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Atxn1P54254 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.07□□□□□ -0.32
Atxn1P54254 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Atxn1P54254 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Atxn1P54254 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.06□□□□□ -0.32
Atxn1P54254 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Atxn1P54254 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Atxn1P54254 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Atxn1P54254 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Atxn1P54254 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms