Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.42□□□□□ -0.58
TgfaP48030 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TgfaP48030 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.42□□□□□ -0.58
TgfaP48030 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.42□□□□□ -0.58
TgfaP48030 Gm38317-201ENSMUST00000195564 343 ntBASIC11.42□□□□□ -0.58
TgfaP48030 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.42□□□□□ -0.58
TgfaP48030 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.42□□□□□ -0.58
TgfaP48030 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.42□□□□□ -0.58
TgfaP48030 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TgfaP48030 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.42□□□□□ -0.58
TgfaP48030 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.42□□□□□ -0.58
TgfaP48030 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
TgfaP48030 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
TgfaP48030 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
TgfaP48030 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TgfaP48030 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.41□□□□□ -0.58
TgfaP48030 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.41□□□□□ -0.58
TgfaP48030 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TgfaP48030 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.41□□□□□ -0.58
TgfaP48030 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Gm23270-201ENSMUST00000104055 131 ntBASIC11.41□□□□□ -0.58
TgfaP48030 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TgfaP48030 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Gm12566-201ENSMUST00000121479 359 ntBASIC11.41□□□□□ -0.58
TgfaP48030 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.41□□□□□ -0.58
TgfaP48030 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
TgfaP48030 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
TgfaP48030 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.41□□□□□ -0.58
TgfaP48030 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.41□□□□□ -0.58
TgfaP48030 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.41□□□□□ -0.58
TgfaP48030 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TgfaP48030 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
TgfaP48030 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
TgfaP48030 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TgfaP48030 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.4□□□□□ -0.58
TgfaP48030 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.4□□□□□ -0.58
TgfaP48030 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Gm43205-201ENSMUST00000198622 1968 ntBASIC11.4□□□□□ -0.58
TgfaP48030 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TgfaP48030 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms