Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Gm14701-201ENSMUST00000117156 348 ntBASIC10.89□□□□□ -0.67
Hist1h1aP43275 Gm14767-201ENSMUST00000121559 586 ntBASIC10.89□□□□□ -0.67
Hist1h1aP43275 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Gm26308-201ENSMUST00000157768 69 ntBASIC10.89□□□□□ -0.67
Hist1h1aP43275 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.89□□□□□ -0.67
Hist1h1aP43275 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hist1h1aP43275 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.88□□□□□ -0.67
Hist1h1aP43275 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.88□□□□□ -0.67
Hist1h1aP43275 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Gm6912-201ENSMUST00000117218 544 ntBASIC10.88□□□□□ -0.67
Hist1h1aP43275 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Gm22175-201ENSMUST00000175007 78 ntBASIC10.88□□□□□ -0.67
Hist1h1aP43275 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Rbfox2-208ENSMUST00000227930 1218 ntBASIC10.88□□□□□ -0.67
Hist1h1aP43275 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.88□□□□□ -0.67
Hist1h1aP43275 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hist1h1aP43275 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h1aP43275 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h1aP43275 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h1aP43275 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hist1h1aP43275 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms