Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.62□□□□□ -0.23
HttP42859 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.62□□□□□ -0.23
HttP42859 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Gm42937-201ENSMUST00000197360 752 ntBASIC13.62□□□□□ -0.23
HttP42859 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.62□□□□□ -0.23
HttP42859 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HttP42859 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.62□□□□□ -0.23
HttP42859 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HttP42859 Gm12291-201ENSMUST00000121627 311 ntBASIC13.62□□□□□ -0.23
HttP42859 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.62□□□□□ -0.23
HttP42859 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
HttP42859 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 Gm807-202ENSMUST00000224929 408 ntBASIC13.62□□□□□ -0.23
HttP42859 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HttP42859 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Gm9072-201ENSMUST00000218390 1514 ntBASIC13.61□□□□□ -0.23
HttP42859 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.61□□□□□ -0.23
HttP42859 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.61□□□□□ -0.23
HttP42859 Gm45527-201ENSMUST00000211052 774 ntBASIC13.61□□□□□ -0.23
HttP42859 Gm45856-201ENSMUST00000212752 416 ntBASIC13.61□□□□□ -0.23
HttP42859 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.61□□□□□ -0.23
HttP42859 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.61□□□□□ -0.23
HttP42859 Gm13315-201ENSMUST00000120376 991 ntBASIC13.61□□□□□ -0.23
HttP42859 Gm3332-201ENSMUST00000189337 928 ntBASIC13.61□□□□□ -0.23
HttP42859 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.61□□□□□ -0.23
HttP42859 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HttP42859 Gm37859-201ENSMUST00000195529 2173 ntBASIC13.61□□□□□ -0.23
HttP42859 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Gm12783-201ENSMUST00000121425 397 ntBASIC13.6□□□□□ -0.23
HttP42859 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.6□□□□□ -0.23
HttP42859 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.6□□□□□ -0.23
HttP42859 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HttP42859 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.6□□□□□ -0.23
HttP42859 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.6□□□□□ -0.23
HttP42859 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.6□□□□□ -0.23
HttP42859 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC13.6□□□□□ -0.23
HttP42859 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Gm4654-201ENSMUST00000183305 982 ntBASIC13.6□□□□□ -0.23
HttP42859 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.6□□□□□ -0.23
HttP42859 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.6□□□□□ -0.23
HttP42859 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC13.6□□□□□ -0.23
HttP42859 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HttP42859 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HttP42859 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HttP42859 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HttP42859 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HttP42859 Gm22133-201ENSMUST00000102082 109 ntBASIC13.59□□□□□ -0.23
HttP42859 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.59□□□□□ -0.23
HttP42859 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.59□□□□□ -0.23
HttP42859 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
HttP42859 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HttP42859 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms