Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Hmx3P42581 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Hmx3P42581 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.04□□□□□ -0.64
Hmx3P42581 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hmx3P42581 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hmx3P42581 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.04□□□□□ -0.64
Hmx3P42581 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.04□□□□□ -0.64
Hmx3P42581 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Hmx3P42581 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Hmx3P42581 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.04□□□□□ -0.64
Hmx3P42581 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Hmx3P42581 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Hmx3P42581 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
Hmx3P42581 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.04□□□□□ -0.64
Hmx3P42581 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.04□□□□□ -0.64
Hmx3P42581 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.04□□□□□ -0.64
Hmx3P42581 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Hmx3P42581 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.04□□□□□ -0.64
Hmx3P42581 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Hmx3P42581 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Gm25287-201ENSMUST00000103846 110 ntBASIC11.03□□□□□ -0.64
Hmx3P42581 Gm22918-201ENSMUST00000103855 110 ntBASIC11.03□□□□□ -0.64
Hmx3P42581 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.03□□□□□ -0.64
Hmx3P42581 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Hmx3P42581 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Hmx3P42581 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Hmx3P42581 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Hmx3P42581 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Hmx3P42581 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Hmx3P42581 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Hmx3P42581 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Hmx3P42581 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Hmx3P42581 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms