Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sox6P40645 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Sox6P40645 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sox6P40645 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.38□□□□□ -0.43
Sox6P40645 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.38□□□□□ -0.43
Sox6P40645 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.38□□□□□ -0.43
Sox6P40645 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.38□□□□□ -0.43
Sox6P40645 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Sox6P40645 Gm6912-201ENSMUST00000117218 544 ntBASIC12.38□□□□□ -0.43
Sox6P40645 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.38□□□□□ -0.43
Sox6P40645 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.38□□□□□ -0.43
Sox6P40645 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sox6P40645 Gm24420-201ENSMUST00000176676 59 ntBASIC12.38□□□□□ -0.43
Sox6P40645 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Sox6P40645 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sox6P40645 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.38□□□□□ -0.43
Sox6P40645 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Sox6P40645 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.38□□□□□ -0.43
Sox6P40645 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Sox6P40645 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.38□□□□□ -0.43
Sox6P40645 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.38□□□□□ -0.43
Sox6P40645 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Sox6P40645 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Sox6P40645 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox6P40645 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sox6P40645 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox6P40645 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox6P40645 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.37□□□□□ -0.43
Sox6P40645 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.37□□□□□ -0.43
Sox6P40645 Gm16215-201ENSMUST00000161990 637 ntBASIC12.37□□□□□ -0.43
Sox6P40645 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.37□□□□□ -0.43
Sox6P40645 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Sox6P40645 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.37□□□□□ -0.43
Sox6P40645 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox6P40645 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.37□□□□□ -0.43
Sox6P40645 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox6P40645 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms