Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC19.3■□□□□ 0.68
Chd1P40201 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Gm45504-201ENSMUST00000211407 2107 ntBASIC19.3■□□□□ 0.68
Chd1P40201 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Chd1P40201 Gm24891-201ENSMUST00000104391 136 ntBASIC19.3■□□□□ 0.68
Chd1P40201 Gm22711-201ENSMUST00000116890 133 ntBASIC19.3■□□□□ 0.68
Chd1P40201 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Chd1P40201 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Gm38228-201ENSMUST00000193169 1293 ntBASIC19.3■□□□□ 0.68
Chd1P40201 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC19.3■□□□□ 0.68
Chd1P40201 Gm3318-201ENSMUST00000217604 1183 ntBASIC19.3■□□□□ 0.68
Chd1P40201 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC19.3■□□□□ 0.68
Chd1P40201 AC165260.2-203ENSMUST00000224237 336 ntBASIC19.3■□□□□ 0.68
Chd1P40201 Gm6430-201ENSMUST00000054664 1248 ntBASIC19.3■□□□□ 0.68
Chd1P40201 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Chd1P40201 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chd1P40201 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.29■□□□□ 0.68
Chd1P40201 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC19.29■□□□□ 0.68
Chd1P40201 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Gm18059-201ENSMUST00000208073 580 ntBASIC19.29■□□□□ 0.68
Chd1P40201 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC19.29■□□□□ 0.68
Chd1P40201 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Chd1P40201 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Chd1P40201 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.29■□□□□ 0.68
Chd1P40201 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC19.29■□□□□ 0.68
Chd1P40201 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.29■□□□□ 0.68
Chd1P40201 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chd1P40201 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Gm15352-201ENSMUST00000118696 270 ntBASIC19.28■□□□□ 0.68
Chd1P40201 Gm11956-201ENSMUST00000119525 512 ntBASIC19.28■□□□□ 0.68
Chd1P40201 Gm42779-201ENSMUST00000198807 406 ntBASIC19.28■□□□□ 0.68
Chd1P40201 Gm42657-201ENSMUST00000201746 211 ntBASIC19.28■□□□□ 0.68
Chd1P40201 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chd1P40201 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC19.28■□□□□ 0.68
Chd1P40201 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chd1P40201 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Chd1P40201 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Chd1P40201 Gm13263-201ENSMUST00000121271 838 ntBASIC19.28■□□□□ 0.68
Chd1P40201 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC19.28■□□□□ 0.68
Chd1P40201 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC19.28■□□□□ 0.68
Chd1P40201 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Chd1P40201 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chd1P40201 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1P40201 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1P40201 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1P40201 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1P40201 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1P40201 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1P40201 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1P40201 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1P40201 Gm8731-201ENSMUST00000118088 412 ntBASIC19.27■□□□□ 0.68
Chd1P40201 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC19.27■□□□□ 0.68
Chd1P40201 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC19.27■□□□□ 0.68
Chd1P40201 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1P40201 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Chd1P40201 Gm27910-201ENSMUST00000185004 107 ntBASIC19.27■□□□□ 0.68
Chd1P40201 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC19.27■□□□□ 0.68
Chd1P40201 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC19.27■□□□□ 0.68
Chd1P40201 CT485606.1-201ENSMUST00000213187 878 ntBASIC19.27■□□□□ 0.68
Chd1P40201 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC19.27■□□□□ 0.68
Chd1P40201 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Chd1P40201 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chd1P40201 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms