Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.18□□□□□ -0.46
Foxa1P35582 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Foxa1P35582 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Foxa1P35582 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Foxa1P35582 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.18□□□□□ -0.46
Foxa1P35582 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.18□□□□□ -0.46
Foxa1P35582 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Foxa1P35582 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.18□□□□□ -0.46
Foxa1P35582 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Proscos-202ENSMUST00000178990 666 ntBASIC12.18□□□□□ -0.46
Foxa1P35582 Gm8652-201ENSMUST00000181363 964 ntBASIC12.18□□□□□ -0.46
Foxa1P35582 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Foxa1P35582 Gm27839-201ENSMUST00000184242 106 ntBASIC12.18□□□□□ -0.46
Foxa1P35582 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.18□□□□□ -0.46
Foxa1P35582 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Foxa1P35582 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.18□□□□□ -0.46
Foxa1P35582 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.18□□□□□ -0.46
Foxa1P35582 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Foxa1P35582 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.17□□□□□ -0.46
Foxa1P35582 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.17□□□□□ -0.46
Foxa1P35582 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Foxa1P35582 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.17□□□□□ -0.46
Foxa1P35582 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Foxa1P35582 Gm11803-201ENSMUST00000119966 444 ntBASIC12.17□□□□□ -0.46
Foxa1P35582 Gm8810-201ENSMUST00000172895 754 ntBASIC12.17□□□□□ -0.46
Foxa1P35582 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.17□□□□□ -0.46
Foxa1P35582 Gm19931-201ENSMUST00000198920 368 ntBASIC12.17□□□□□ -0.46
Foxa1P35582 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.17□□□□□ -0.46
Foxa1P35582 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.17□□□□□ -0.46
Foxa1P35582 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Foxa1P35582 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Foxa1P35582 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Foxa1P35582 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.17□□□□□ -0.46
Foxa1P35582 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Foxa1P35582 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Foxa1P35582 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Foxa1P35582 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Foxa1P35582 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.16□□□□□ -0.46
Foxa1P35582 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.16□□□□□ -0.46
Foxa1P35582 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Foxa1P35582 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.16□□□□□ -0.46
Foxa1P35582 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Foxa1P35582 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Foxa1P35582 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms