Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Mmp13P33435 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Mmp13P33435 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Mmp13P33435 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp13P33435 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.5□□□□□ -0.25
Mmp13P33435 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp13P33435 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp13P33435 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Mmp13P33435 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.5□□□□□ -0.25
Mmp13P33435 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp13P33435 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Mmp13P33435 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp13P33435 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Mmp13P33435 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.49□□□□□ -0.25
Mmp13P33435 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.49□□□□□ -0.25
Mmp13P33435 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Mmp13P33435 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Gm14928-201ENSMUST00000120198 477 ntBASIC13.49□□□□□ -0.25
Mmp13P33435 Gm11424-201ENSMUST00000121929 829 ntBASIC13.49□□□□□ -0.25
Mmp13P33435 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.49□□□□□ -0.25
Mmp13P33435 Gm12091-201ENSMUST00000146791 830 ntBASIC13.49□□□□□ -0.25
Mmp13P33435 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Gm5354-201ENSMUST00000182417 973 ntBASIC13.49□□□□□ -0.25
Mmp13P33435 Mir6392-201ENSMUST00000184924 108 ntBASIC13.49□□□□□ -0.25
Mmp13P33435 Gm8515-201ENSMUST00000194852 576 ntBASIC13.49□□□□□ -0.25
Mmp13P33435 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.49□□□□□ -0.25
Mmp13P33435 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Mmp13P33435 Gm15823-201ENSMUST00000064305 670 ntBASIC13.49□□□□□ -0.25
Mmp13P33435 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Mmp13P33435 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.49□□□□□ -0.25
Mmp13P33435 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Mmp13P33435 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Mmp13P33435 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.49□□□□□ -0.25
Mmp13P33435 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Mmp13P33435 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Mmp13P33435 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Mmp13P33435 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.48□□□□□ -0.25
Mmp13P33435 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.48□□□□□ -0.25
Mmp13P33435 Gm15240-201ENSMUST00000118156 720 ntBASIC13.48□□□□□ -0.25
Mmp13P33435 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Gm23984-201ENSMUST00000157139 203 ntBASIC13.48□□□□□ -0.25
Mmp13P33435 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Mir7221-201ENSMUST00000184009 72 ntBASIC13.48□□□□□ -0.25
Mmp13P33435 Gm5279-201ENSMUST00000199575 745 ntBASIC13.48□□□□□ -0.25
Mmp13P33435 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Gm18624-201ENSMUST00000220966 658 ntBASIC13.48□□□□□ -0.25
Mmp13P33435 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.48□□□□□ -0.25
Mmp13P33435 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Mmp13P33435 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Mmp13P33435 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.48□□□□□ -0.25
Mmp13P33435 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.48□□□□□ -0.25
Mmp13P33435 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Mmp13P33435 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp13P33435 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp13P33435 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
Mmp13P33435 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp13P33435 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Mmp13P33435 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp13P33435 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Mmp13P33435 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Mmp13P33435 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp13P33435 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.47□□□□□ -0.25
Mmp13P33435 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.47□□□□□ -0.25
Mmp13P33435 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp13P33435 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp13P33435 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp13P33435 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Mmp13P33435 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms