Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm25927-201ENSMUST00000175058 117 ntBASIC13.54□□□□□ -0.24
Nfkb1P25799 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.54□□□□□ -0.24
Nfkb1P25799 Gm43179-201ENSMUST00000198797 275 ntBASIC13.54□□□□□ -0.24
Nfkb1P25799 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.54□□□□□ -0.24
Nfkb1P25799 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.54□□□□□ -0.24
Nfkb1P25799 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Nfkb1P25799 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.54□□□□□ -0.24
Nfkb1P25799 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nfkb1P25799 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.54□□□□□ -0.24
Nfkb1P25799 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nfkb1P25799 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Mir1247-201ENSMUST00000116706 82 ntBASIC13.53□□□□□ -0.24
Nfkb1P25799 Gm2231-201ENSMUST00000125661 612 ntBASIC13.53□□□□□ -0.24
Nfkb1P25799 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.53□□□□□ -0.24
Nfkb1P25799 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.53□□□□□ -0.24
Nfkb1P25799 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.53□□□□□ -0.24
Nfkb1P25799 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.53□□□□□ -0.24
Nfkb1P25799 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.53□□□□□ -0.24
Nfkb1P25799 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.53□□□□□ -0.24
Nfkb1P25799 Matn2-206ENSMUST00000228570 2798 ntBASIC13.53□□□□□ -0.24
Nfkb1P25799 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Nfkb1P25799 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nfkb1P25799 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nfkb1P25799 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nfkb1P25799 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Nfkb1P25799 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Nfkb1P25799 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nfkb1P25799 Acot6-202ENSMUST00000222921 3622 ntBASIC13.52□□□□□ -0.24
Nfkb1P25799 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.52□□□□□ -0.24
Nfkb1P25799 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.52□□□□□ -0.24
Nfkb1P25799 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nfkb1P25799 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nfkb1P25799 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Nfkb1P25799 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.52□□□□□ -0.24
Nfkb1P25799 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nfkb1P25799 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nfkb1P25799 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nfkb1P25799 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.52□□□□□ -0.25
Nfkb1P25799 Gm25261-201ENSMUST00000157416 134 ntBASIC13.52□□□□□ -0.25
Nfkb1P25799 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.52□□□□□ -0.25
Nfkb1P25799 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nfkb1P25799 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.52□□□□□ -0.25
Nfkb1P25799 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nfkb1P25799 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.52□□□□□ -0.25
Nfkb1P25799 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Nfkb1P25799 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nfkb1P25799 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms