Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Col8a2P25318 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.99□□□□□ -0.65
Col8a2P25318 Gm12363-201ENSMUST00000122250 668 ntBASIC10.99□□□□□ -0.65
Col8a2P25318 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.99□□□□□ -0.65
Col8a2P25318 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.99□□□□□ -0.65
Col8a2P25318 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.99□□□□□ -0.65
Col8a2P25318 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Mir6420-201ENSMUST00000185032 102 ntBASIC10.99□□□□□ -0.65
Col8a2P25318 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.99□□□□□ -0.65
Col8a2P25318 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.99□□□□□ -0.65
Col8a2P25318 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Col8a2P25318 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.99□□□□□ -0.65
Col8a2P25318 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Col8a2P25318 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Col8a2P25318 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Gm38346-201ENSMUST00000192379 2639 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.98□□□□□ -0.65
Col8a2P25318 Gm12384-201ENSMUST00000119228 919 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Gm16479-201ENSMUST00000121706 932 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Gm25261-201ENSMUST00000157416 134 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Gm42693-201ENSMUST00000196779 631 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Gm45880-201ENSMUST00000213041 853 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.98□□□□□ -0.65
Col8a2P25318 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.98□□□□□ -0.65
Col8a2P25318 AC153962.4-201ENSMUST00000217878 242 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.98□□□□□ -0.65
Col8a2P25318 Tyms-ps-201ENSMUST00000219550 915 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.98□□□□□ -0.65
Col8a2P25318 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Gm9899-201ENSMUST00000065519 555 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Gm10268-201ENSMUST00000085340 555 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Col8a2P25318 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.98□□□□□ -0.65
Col8a2P25318 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Ntrk2-209ENSMUST00000225950 2640 ntBASIC10.98□□□□□ -0.65
Col8a2P25318 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Col8a2P25318 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Col8a2P25318 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.97□□□□□ -0.65
Col8a2P25318 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Col8a2P25318 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Col8a2P25318 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms