Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BdnfP21237 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.66□□□□□ -0.38
BdnfP21237 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.66□□□□□ -0.38
BdnfP21237 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
BdnfP21237 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.66□□□□□ -0.38
BdnfP21237 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
BdnfP21237 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
BdnfP21237 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
BdnfP21237 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.66□□□□□ -0.38
BdnfP21237 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.66□□□□□ -0.38
BdnfP21237 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.66□□□□□ -0.38
BdnfP21237 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.66□□□□□ -0.38
BdnfP21237 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
BdnfP21237 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
BdnfP21237 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
BdnfP21237 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.66□□□□□ -0.38
BdnfP21237 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
BdnfP21237 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
BdnfP21237 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.65□□□□□ -0.38
BdnfP21237 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.65□□□□□ -0.38
BdnfP21237 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.65□□□□□ -0.38
BdnfP21237 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
BdnfP21237 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
BdnfP21237 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.65□□□□□ -0.38
BdnfP21237 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.65□□□□□ -0.38
BdnfP21237 Gm15240-201ENSMUST00000118156 720 ntBASIC12.65□□□□□ -0.38
BdnfP21237 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.65□□□□□ -0.38
BdnfP21237 Mir6956-201ENSMUST00000183598 62 ntBASIC12.65□□□□□ -0.38
BdnfP21237 Gm45841-201ENSMUST00000207700 164 ntBASIC12.65□□□□□ -0.38
BdnfP21237 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.65□□□□□ -0.38
BdnfP21237 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
BdnfP21237 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.65□□□□□ -0.38
BdnfP21237 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
BdnfP21237 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.65□□□□□ -0.39
BdnfP21237 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
BdnfP21237 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BdnfP21237 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms