Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.84□□□□□ -0.51
Cd48P18181 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Cd48P18181 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.84□□□□□ -0.51
Cd48P18181 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Cd48P18181 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Gm13223-201ENSMUST00000118609 747 ntBASIC11.84□□□□□ -0.51
Cd48P18181 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.84□□□□□ -0.51
Cd48P18181 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.84□□□□□ -0.51
Cd48P18181 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cd48P18181 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.84□□□□□ -0.51
Cd48P18181 Gm24447-201ENSMUST00000083977 338 ntBASIC11.84□□□□□ -0.51
Cd48P18181 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cd48P18181 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Cd48P18181 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.84□□□□□ -0.51
Cd48P18181 Pck2-205ENSMUST00000226352 2784 ntBASIC11.84□□□□□ -0.51
Cd48P18181 Rubie-203ENSMUST00000227803 2430 ntBASIC11.84□□□□□ -0.51
Cd48P18181 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cd48P18181 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.51
Cd48P18181 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Cd48P18181 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cd48P18181 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.83□□□□□ -0.52
Cd48P18181 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cd48P18181 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Cd48P18181 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Cd48P18181 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cd48P18181 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.83□□□□□ -0.52
Cd48P18181 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Cd48P18181 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.83□□□□□ -0.52
Cd48P18181 Gm44872-201ENSMUST00000207864 420 ntBASIC11.83□□□□□ -0.52
Cd48P18181 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.83□□□□□ -0.52
Cd48P18181 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.83□□□□□ -0.52
Cd48P18181 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Cd48P18181 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Cd48P18181 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.83□□□□□ -0.52
Cd48P18181 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cd48P18181 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd48P18181 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.82□□□□□ -0.52
Cd48P18181 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd48P18181 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd48P18181 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd48P18181 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd48P18181 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd48P18181 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd48P18181 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.82□□□□□ -0.52
Cd48P18181 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd48P18181 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.82□□□□□ -0.52
Cd48P18181 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cd48P18181 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.82□□□□□ -0.52
Cd48P18181 Mir7684-201ENSMUST00000183858 60 ntBASIC11.82□□□□□ -0.52
Cd48P18181 Mir7221-201ENSMUST00000184009 72 ntBASIC11.82□□□□□ -0.52
Cd48P18181 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.82□□□□□ -0.52
Cd48P18181 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cd48P18181 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms