Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ccl3P10855 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl3P10855 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ccl3P10855 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ccl3P10855 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ccl3P10855 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.58□□□□□ -0.56
Ccl3P10855 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccl3P10855 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.58□□□□□ -0.56
Ccl3P10855 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 Gm9445-201ENSMUST00000207454 1285 ntBASIC11.58□□□□□ -0.56
Ccl3P10855 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.58□□□□□ -0.56
Ccl3P10855 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 Gm18212-201ENSMUST00000211678 889 ntBASIC11.58□□□□□ -0.56
Ccl3P10855 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.58□□□□□ -0.56
Ccl3P10855 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.58□□□□□ -0.56
Ccl3P10855 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Nsd1-205ENSMUST00000224693 852 ntBASIC11.58□□□□□ -0.56
Ccl3P10855 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Ccl3P10855 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ccl3P10855 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccl3P10855 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ccl3P10855 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.57□□□□□ -0.56
Ccl3P10855 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Gm11439-201ENSMUST00000118598 409 ntBASIC11.57□□□□□ -0.56
Ccl3P10855 Gm13875-201ENSMUST00000120162 282 ntBASIC11.57□□□□□ -0.56
Ccl3P10855 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Ccl3P10855 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.57□□□□□ -0.56
Ccl3P10855 Gm27341-201ENSMUST00000183570 106 ntBASIC11.57□□□□□ -0.56
Ccl3P10855 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccl3P10855 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccl3P10855 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccl3P10855 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms