Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm37201-201ENSMUST00000191845 523 ntBASIC13.92□□□□□ -0.18
Hoxc8P09025 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxc8P09025 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.92□□□□□ -0.18
Hoxc8P09025 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.92□□□□□ -0.18
Hoxc8P09025 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc8P09025 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.92□□□□□ -0.18
Hoxc8P09025 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxc8P09025 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.91□□□□□ -0.18
Hoxc8P09025 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.91□□□□□ -0.18
Hoxc8P09025 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Mir5120-201ENSMUST00000175020 78 ntBASIC13.91□□□□□ -0.18
Hoxc8P09025 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.91□□□□□ -0.18
Hoxc8P09025 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
Hoxc8P09025 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc8P09025 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Hoxc8P09025 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.9□□□□□ -0.18
Hoxc8P09025 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Gm24845-201ENSMUST00000158034 109 ntBASIC13.9□□□□□ -0.18
Hoxc8P09025 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC13.9□□□□□ -0.18
Hoxc8P09025 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.9□□□□□ -0.18
Hoxc8P09025 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Hoxc8P09025 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxc8P09025 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms