Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.96□□□□□ -0.17
TnfP06804 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Gm42627-201ENSMUST00000197347 224 ntBASIC13.96□□□□□ -0.17
TnfP06804 Gm43133-201ENSMUST00000197472 463 ntBASIC13.96□□□□□ -0.17
TnfP06804 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.96□□□□□ -0.17
TnfP06804 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.96□□□□□ -0.17
TnfP06804 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TnfP06804 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.96□□□□□ -0.17
TnfP06804 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TnfP06804 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TnfP06804 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.96□□□□□ -0.18
TnfP06804 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TnfP06804 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TnfP06804 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TnfP06804 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
TnfP06804 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TnfP06804 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TnfP06804 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.95□□□□□ -0.18
TnfP06804 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.95□□□□□ -0.18
TnfP06804 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.95□□□□□ -0.18
TnfP06804 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.95□□□□□ -0.18
TnfP06804 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.95□□□□□ -0.18
TnfP06804 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
TnfP06804 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.95□□□□□ -0.18
TnfP06804 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.95□□□□□ -0.18
TnfP06804 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TnfP06804 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.95□□□□□ -0.18
TnfP06804 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.95□□□□□ -0.18
TnfP06804 Gm43179-201ENSMUST00000198797 275 ntBASIC13.95□□□□□ -0.18
TnfP06804 Gm43118-201ENSMUST00000199149 775 ntBASIC13.95□□□□□ -0.18
TnfP06804 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.95□□□□□ -0.18
TnfP06804 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TnfP06804 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TnfP06804 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
TnfP06804 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.94□□□□□ -0.18
TnfP06804 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.94□□□□□ -0.18
TnfP06804 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
TnfP06804 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
TnfP06804 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.94□□□□□ -0.18
TnfP06804 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Gm7809-201ENSMUST00000153199 742 ntBASIC13.94□□□□□ -0.18
TnfP06804 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TnfP06804 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TnfP06804 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Gm27501-201ENSMUST00000183599 107 ntBASIC13.94□□□□□ -0.18
TnfP06804 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TnfP06804 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.94□□□□□ -0.18
TnfP06804 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TnfP06804 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TnfP06804 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TnfP06804 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TnfP06804 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TnfP06804 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TnfP06804 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.93□□□□□ -0.18
TnfP06804 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.93□□□□□ -0.18
TnfP06804 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms