Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Gm4804-201ENSMUST00000182234 999 ntBASIC11□□□□□ -0.65
CfdP03953 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CfdP03953 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11□□□□□ -0.65
CfdP03953 Gm10766-202ENSMUST00000194123 606 ntBASIC11□□□□□ -0.65
CfdP03953 AC131710.1-201ENSMUST00000228336 990 ntBASIC11□□□□□ -0.65
CfdP03953 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Gm10819-201ENSMUST00000099988 561 ntBASIC11□□□□□ -0.65
CfdP03953 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
CfdP03953 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11□□□□□ -0.65
CfdP03953 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CfdP03953 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11□□□□□ -0.65
CfdP03953 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
CfdP03953 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11□□□□□ -0.65
CfdP03953 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CfdP03953 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.99□□□□□ -0.65
CfdP03953 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CfdP03953 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
CfdP03953 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
CfdP03953 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC10.99□□□□□ -0.65
CfdP03953 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
CfdP03953 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.99□□□□□ -0.65
CfdP03953 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.99□□□□□ -0.65
CfdP03953 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.99□□□□□ -0.65
CfdP03953 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.99□□□□□ -0.65
CfdP03953 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.99□□□□□ -0.65
CfdP03953 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.99□□□□□ -0.65
CfdP03953 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
CfdP03953 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.98□□□□□ -0.65
CfdP03953 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
CfdP03953 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.98□□□□□ -0.65
CfdP03953 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CfdP03953 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CfdP03953 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
CfdP03953 Gm13886-201ENSMUST00000117876 1183 ntBASIC10.98□□□□□ -0.65
CfdP03953 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms