Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
Col4a1P02463 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col4a1P02463 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
Col4a1P02463 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Gm9924-202ENSMUST00000192760 2311 ntBASIC15.87■□□□□ 0.13
Col4a1P02463 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.87■□□□□ 0.13
Col4a1P02463 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.87■□□□□ 0.13
Col4a1P02463 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Col4a1P02463 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.87■□□□□ 0.13
Col4a1P02463 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Col4a1P02463 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Col4a1P02463 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Col4a1P02463 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Gm23699-201ENSMUST00000158835 135 ntBASIC15.86■□□□□ 0.13
Col4a1P02463 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC15.86■□□□□ 0.13
Col4a1P02463 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC15.86■□□□□ 0.13
Col4a1P02463 AC163667.3-201ENSMUST00000225774 222 ntBASIC15.86■□□□□ 0.13
Col4a1P02463 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.86■□□□□ 0.13
Col4a1P02463 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Col4a1P02463 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Col4a1P02463 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.86■□□□□ 0.13
Col4a1P02463 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Gm12314-201ENSMUST00000118104 538 ntBASIC15.86■□□□□ 0.13
Col4a1P02463 Gm11331-201ENSMUST00000119764 288 ntBASIC15.86■□□□□ 0.13
Col4a1P02463 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC15.86■□□□□ 0.13
Col4a1P02463 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Gm44100-201ENSMUST00000204329 436 ntBASIC15.86■□□□□ 0.13
Col4a1P02463 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Gm29787-201ENSMUST00000222129 849 ntBASIC15.86■□□□□ 0.13
Col4a1P02463 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col4a1P02463 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC15.85■□□□□ 0.13
Col4a1P02463 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC15.85■□□□□ 0.13
Col4a1P02463 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.85■□□□□ 0.13
Col4a1P02463 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Col4a1P02463 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Col4a1P02463 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col4a1P02463 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col4a1P02463 Gm13813-201ENSMUST00000120998 787 ntBASIC15.85■□□□□ 0.13
Col4a1P02463 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Col4a1P02463 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col4a1P02463 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a1P02463 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a1P02463 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a1P02463 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a1P02463 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a1P02463 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Col4a1P02463 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Col4a1P02463 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col4a1P02463 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Col4a1P02463 Gm22902-201ENSMUST00000158488 302 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 138.4 ms