Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.33□□□□□ -0.6
H3f3cP02301 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC11.33□□□□□ -0.6
H3f3cP02301 Gm12490-201ENSMUST00000120255 560 ntBASIC11.33□□□□□ -0.6
H3f3cP02301 Gm11918-201ENSMUST00000121660 179 ntBASIC11.33□□□□□ -0.6
H3f3cP02301 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.33□□□□□ -0.6
H3f3cP02301 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Gm29608-201ENSMUST00000190444 463 ntBASIC11.33□□□□□ -0.6
H3f3cP02301 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.33□□□□□ -0.6
H3f3cP02301 Gm8463-201ENSMUST00000208573 613 ntBASIC11.33□□□□□ -0.6
H3f3cP02301 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.33□□□□□ -0.6
H3f3cP02301 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
H3f3cP02301 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
H3f3cP02301 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
H3f3cP02301 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H3f3cP02301 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
H3f3cP02301 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
H3f3cP02301 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.32□□□□□ -0.6
H3f3cP02301 Gm5687-201ENSMUST00000118252 640 ntBASIC11.32□□□□□ -0.6
H3f3cP02301 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.32□□□□□ -0.6
H3f3cP02301 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.32□□□□□ -0.6
H3f3cP02301 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
H3f3cP02301 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.32□□□□□ -0.6
H3f3cP02301 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.32□□□□□ -0.6
H3f3cP02301 Gm26315-201ENSMUST00000083890 321 ntBASIC11.32□□□□□ -0.6
H3f3cP02301 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
H3f3cP02301 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
H3f3cP02301 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.32□□□□□ -0.6
H3f3cP02301 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.32□□□□□ -0.6
H3f3cP02301 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H3f3cP02301 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.32□□□□□ -0.6
H3f3cP02301 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.32□□□□□ -0.6
H3f3cP02301 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H3f3cP02301 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.31□□□□□ -0.6
H3f3cP02301 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H3f3cP02301 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.31□□□□□ -0.6
H3f3cP02301 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.31□□□□□ -0.6
H3f3cP02301 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.31□□□□□ -0.6
H3f3cP02301 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
H3f3cP02301 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.31□□□□□ -0.6
H3f3cP02301 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.31□□□□□ -0.6
H3f3cP02301 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H3f3cP02301 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
H3f3cP02301 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.31□□□□□ -0.6
H3f3cP02301 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms