Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ubr1O70481 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ubr1O70481 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC16.76■□□□□ 0.27
Ubr1O70481 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ubr1O70481 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.76■□□□□ 0.27
Ubr1O70481 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.76■□□□□ 0.27
Ubr1O70481 AC159205.5-202ENSMUST00000224849 386 ntBASIC16.76■□□□□ 0.27
Ubr1O70481 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.76■□□□□ 0.27
Ubr1O70481 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Gm10312-201ENSMUST00000078515 489 ntBASIC16.76■□□□□ 0.27
Ubr1O70481 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.76■□□□□ 0.27
Ubr1O70481 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC16.76■□□□□ 0.27
Ubr1O70481 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ubr1O70481 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ubr1O70481 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ubr1O70481 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Ubr1O70481 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.75■□□□□ 0.27
Ubr1O70481 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Ubr1O70481 Gm44651-201ENSMUST00000207343 372 ntBASIC16.75■□□□□ 0.27
Ubr1O70481 Gm29787-201ENSMUST00000222129 849 ntBASIC16.75■□□□□ 0.27
Ubr1O70481 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ubr1O70481 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.75■□□□□ 0.27
Ubr1O70481 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC16.75■□□□□ 0.27
Ubr1O70481 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.75■□□□□ 0.27
Ubr1O70481 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Ubr1O70481 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC16.75■□□□□ 0.27
Ubr1O70481 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.75■□□□□ 0.27
Ubr1O70481 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ubr1O70481 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC16.75■□□□□ 0.27
Ubr1O70481 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ubr1O70481 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC16.74■□□□□ 0.27
Ubr1O70481 Gm11331-201ENSMUST00000119764 288 ntBASIC16.74■□□□□ 0.27
Ubr1O70481 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ubr1O70481 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC16.74■□□□□ 0.27
Ubr1O70481 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC16.74■□□□□ 0.27
Ubr1O70481 Gm17812-201ENSMUST00000204935 318 ntBASIC16.74■□□□□ 0.27
Ubr1O70481 Gm45433-201ENSMUST00000209386 247 ntBASIC16.74■□□□□ 0.27
Ubr1O70481 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC16.74■□□□□ 0.27
Ubr1O70481 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC16.74■□□□□ 0.27
Ubr1O70481 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ubr1O70481 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Gm5070-201ENSMUST00000177599 862 ntBASIC16.74■□□□□ 0.27
Ubr1O70481 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ubr1O70481 Gm27552-201ENSMUST00000183351 62 ntBASIC16.74■□□□□ 0.27
Ubr1O70481 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Gm27844-201ENSMUST00000183613 62 ntBASIC16.74■□□□□ 0.27
Ubr1O70481 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Ubr1O70481 Gm8617-201ENSMUST00000118796 2222 ntBASIC16.74■□□□□ 0.27
Ubr1O70481 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ubr1O70481 CU062626.3-201ENSMUST00000225522 1411 ntBASIC16.74■□□□□ 0.27
Ubr1O70481 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms