Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pknox1O70477 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pknox1O70477 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pknox1O70477 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pknox1O70477 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pknox1O70477 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pknox1O70477 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.1□□□□□ -0.31
Pknox1O70477 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Pknox1O70477 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.1□□□□□ -0.31
Pknox1O70477 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.1□□□□□ -0.31
Pknox1O70477 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pknox1O70477 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.09□□□□□ -0.31
Pknox1O70477 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.09□□□□□ -0.31
Pknox1O70477 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.09□□□□□ -0.31
Pknox1O70477 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pknox1O70477 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
Pknox1O70477 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Pknox1O70477 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.09□□□□□ -0.31
Pknox1O70477 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Gm28760-201ENSMUST00000185995 736 ntBASIC13.09□□□□□ -0.31
Pknox1O70477 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pknox1O70477 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.09□□□□□ -0.31
Pknox1O70477 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pknox1O70477 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pknox1O70477 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pknox1O70477 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.09□□□□□ -0.31
Pknox1O70477 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pknox1O70477 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pknox1O70477 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.08□□□□□ -0.31
Pknox1O70477 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pknox1O70477 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pknox1O70477 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pknox1O70477 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pknox1O70477 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pknox1O70477 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pknox1O70477 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.08□□□□□ -0.32
Pknox1O70477 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pknox1O70477 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.08□□□□□ -0.32
Pknox1O70477 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pknox1O70477 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pknox1O70477 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pknox1O70477 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pknox1O70477 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pknox1O70477 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.08□□□□□ -0.32
Pknox1O70477 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Pknox1O70477 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Pknox1O70477 Gm15920-201ENSMUST00000118998 402 ntBASIC13.08□□□□□ -0.32
Pknox1O70477 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pknox1O70477 Gm15321-201ENSMUST00000121290 288 ntBASIC13.08□□□□□ -0.32
Pknox1O70477 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.08□□□□□ -0.32
Pknox1O70477 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pknox1O70477 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms