Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl13O55038 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cxcl13O55038 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl13O55038 Gm6023-201ENSMUST00000118217 606 ntBASIC11.12□□□□□ -0.63
Cxcl13O55038 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.12□□□□□ -0.63
Cxcl13O55038 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.12□□□□□ -0.63
Cxcl13O55038 Gm27516-201ENSMUST00000184237 98 ntBASIC11.12□□□□□ -0.63
Cxcl13O55038 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.12□□□□□ -0.63
Cxcl13O55038 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.12□□□□□ -0.63
Cxcl13O55038 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Cxcl13O55038 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cxcl13O55038 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cxcl13O55038 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.11□□□□□ -0.63
Cxcl13O55038 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.11□□□□□ -0.63
Cxcl13O55038 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Cxcl13O55038 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.11□□□□□ -0.63
Cxcl13O55038 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cxcl13O55038 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Olfr284-202ENSMUST00000206647 966 ntBASIC11.11□□□□□ -0.63
Cxcl13O55038 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Gm18935-201ENSMUST00000212692 664 ntBASIC11.11□□□□□ -0.63
Cxcl13O55038 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.11□□□□□ -0.63
Cxcl13O55038 Gm7172-201ENSMUST00000218047 1152 ntBASIC11.11□□□□□ -0.63
Cxcl13O55038 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Gm45930-201ENSMUST00000221330 292 ntBASIC11.11□□□□□ -0.63
Cxcl13O55038 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.11□□□□□ -0.63
Cxcl13O55038 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.11□□□□□ -0.63
Cxcl13O55038 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.11□□□□□ -0.63
Cxcl13O55038 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cxcl13O55038 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Cxcl13O55038 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cxcl13O55038 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.1□□□□□ -0.63
Cxcl13O55038 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm14723-201ENSMUST00000118686 215 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.1□□□□□ -0.63
Cxcl13O55038 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cxcl13O55038 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Cxcl13O55038 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms