Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC19.87■□□□□ 0.77
Polr1aO35134 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC19.87■□□□□ 0.77
Polr1aO35134 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC19.87■□□□□ 0.77
Polr1aO35134 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC19.87■□□□□ 0.77
Polr1aO35134 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC19.87■□□□□ 0.77
Polr1aO35134 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC19.87■□□□□ 0.77
Polr1aO35134 AC154252.2-201ENSMUST00000223593 767 ntBASIC19.87■□□□□ 0.77
Polr1aO35134 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Polr1aO35134 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC19.86■□□□□ 0.77
Polr1aO35134 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Polr1aO35134 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Polr1aO35134 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Gm14644-201ENSMUST00000116671 647 ntBASIC19.86■□□□□ 0.77
Polr1aO35134 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC19.86■□□□□ 0.77
Polr1aO35134 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC19.86■□□□□ 0.77
Polr1aO35134 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC19.86■□□□□ 0.77
Polr1aO35134 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Polr1aO35134 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Polr1aO35134 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Polr1aO35134 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Polr1aO35134 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC19.85■□□□□ 0.77
Polr1aO35134 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC19.85■□□□□ 0.77
Polr1aO35134 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC19.85■□□□□ 0.77
Polr1aO35134 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Polr1aO35134 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC19.85■□□□□ 0.77
Polr1aO35134 Gm27627-201ENSMUST00000183644 150 ntBASIC19.85■□□□□ 0.77
Polr1aO35134 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Polr1aO35134 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Polr1aO35134 Gm2420-202ENSMUST00000202224 2249 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Polr1aO35134 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Polr1aO35134 Gm13408-201ENSMUST00000119822 798 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm13935-201ENSMUST00000121859 798 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC19.84■□□□□ 0.77
Polr1aO35134 Gm29615-201ENSMUST00000185371 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm28224-201ENSMUST00000186078 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm29001-201ENSMUST00000186177 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm28292-201ENSMUST00000186593 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm28101-201ENSMUST00000187608 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm29076-201ENSMUST00000187689 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm28302-201ENSMUST00000187931 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm28646-201ENSMUST00000188220 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm28205-201ENSMUST00000189177 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm29032-201ENSMUST00000189797 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm28695-201ENSMUST00000190300 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Gm37448-201ENSMUST00000192795 697 ntBASIC19.84■□□□□ 0.77
Polr1aO35134 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms