Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Gm8410-201ENSMUST00000117225 605 ntBASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Gm15393-201ENSMUST00000120499 219 ntBASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Gm24158-201ENSMUST00000175263 71 ntBASIC12.01□□□□□ -0.49
Shisa8J3QNX5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.01□□□□□ -0.49
Shisa8J3QNX5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Shisa8J3QNX5 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Shisa8J3QNX5 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12□□□□□ -0.49
Shisa8J3QNX5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Shisa8J3QNX5 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Gm27533-201ENSMUST00000183800 152 ntBASIC12□□□□□ -0.49
Shisa8J3QNX5 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12□□□□□ -0.49
Shisa8J3QNX5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12□□□□□ -0.49
Shisa8J3QNX5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Shisa8J3QNX5 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12□□□□□ -0.49
Shisa8J3QNX5 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12□□□□□ -0.49
Shisa8J3QNX5 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Shisa8J3QNX5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Paupar-201ENSMUST00000194826 3482 ntBASIC12□□□□□ -0.49
Shisa8J3QNX5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Shisa8J3QNX5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shisa8J3QNX5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Shisa8J3QNX5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shisa8J3QNX5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms