Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3139J3QK78 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3139J3QK78 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3139J3QK78 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3139J3QK78 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3139J3QK78 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Gm3139J3QK78 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.12□□□□□ -0.31
Gm3139J3QK78 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.12□□□□□ -0.31
Gm3139J3QK78 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Gm3139J3QK78 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.12□□□□□ -0.31
Gm3139J3QK78 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.11□□□□□ -0.31
Gm3139J3QK78 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Gm3139J3QK78 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC13.11□□□□□ -0.31
Gm3139J3QK78 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Gm7029-201ENSMUST00000173226 450 ntBASIC13.11□□□□□ -0.31
Gm3139J3QK78 Gm5370-201ENSMUST00000187187 574 ntBASIC13.11□□□□□ -0.31
Gm3139J3QK78 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.11□□□□□ -0.31
Gm3139J3QK78 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.11□□□□□ -0.31
Gm3139J3QK78 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Gm3139J3QK78 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.1□□□□□ -0.31
Gm3139J3QK78 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Gm27514-201ENSMUST00000183692 110 ntBASIC13.1□□□□□ -0.31
Gm3139J3QK78 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Gm4768-201ENSMUST00000206199 686 ntBASIC13.1□□□□□ -0.31
Gm3139J3QK78 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Gm3139J3QK78 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms