Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
NpcdF8VQB8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NpcdF8VQB8 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC15.83■□□□□ 0.12
NpcdF8VQB8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NpcdF8VQB8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.82■□□□□ 0.12
NpcdF8VQB8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.82■□□□□ 0.12
NpcdF8VQB8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Gm43058-201ENSMUST00000197645 625 ntBASIC15.82■□□□□ 0.12
NpcdF8VQB8 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.82■□□□□ 0.12
NpcdF8VQB8 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NpcdF8VQB8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Gm4760-201ENSMUST00000119663 1030 ntBASIC15.81■□□□□ 0.12
NpcdF8VQB8 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Gm8885-201ENSMUST00000189382 598 ntBASIC15.81■□□□□ 0.12
NpcdF8VQB8 Gm44405-201ENSMUST00000198952 126 ntBASIC15.81■□□□□ 0.12
NpcdF8VQB8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC15.81■□□□□ 0.12
NpcdF8VQB8 AC122305.4-201ENSMUST00000216159 1206 ntBASIC15.81■□□□□ 0.12
NpcdF8VQB8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.81■□□□□ 0.12
NpcdF8VQB8 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NpcdF8VQB8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms