Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Gm15131-201ENSMUST00000119124 595 ntBASIC12.36□□□□□ -0.43
Colca2F8VPY8 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Gm12208-201ENSMUST00000122004 163 ntBASIC12.36□□□□□ -0.43
Colca2F8VPY8 Gm14665-201ENSMUST00000122294 557 ntBASIC12.36□□□□□ -0.43
Colca2F8VPY8 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Gm16296-201ENSMUST00000159905 325 ntBASIC12.36□□□□□ -0.43
Colca2F8VPY8 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.36□□□□□ -0.43
Colca2F8VPY8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Gm9555-201ENSMUST00000200908 583 ntBASIC12.36□□□□□ -0.43
Colca2F8VPY8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Colca2F8VPY8 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Colca2F8VPY8 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.36□□□□□ -0.43
Colca2F8VPY8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Colca2F8VPY8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Colca2F8VPY8 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm11597-201ENSMUST00000121423 964 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm29615-201ENSMUST00000185371 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm28882-201ENSMUST00000185504 314 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm28224-201ENSMUST00000186078 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm29001-201ENSMUST00000186177 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm28292-201ENSMUST00000186593 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm28101-201ENSMUST00000187608 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm29076-201ENSMUST00000187689 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm28302-201ENSMUST00000187931 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm28646-201ENSMUST00000188220 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm28205-201ENSMUST00000189177 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm29032-201ENSMUST00000189797 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm28695-201ENSMUST00000190300 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm37448-201ENSMUST00000192795 697 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm19931-201ENSMUST00000198920 368 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm44551-201ENSMUST00000208804 171 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.35□□□□□ -0.43
Colca2F8VPY8 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.35□□□□□ -0.43
Colca2F8VPY8 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Colca2F8VPY8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Colca2F8VPY8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.34□□□□□ -0.43
Colca2F8VPY8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Colca2F8VPY8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Colca2F8VPY8 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Colca2F8VPY8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Colca2F8VPY8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Colca2F8VPY8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Colca2F8VPY8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms