Protein–RNA interactions for Protein: F6RGI3

Gm340, Predicted gene 340, mousemouse

Predictions only

Length 1,242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm340F6RGI3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm340F6RGI3 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm340F6RGI3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm340F6RGI3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Gm340F6RGI3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Gm340F6RGI3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.82□□□□□ -0.36
Gm340F6RGI3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Gm18624-201ENSMUST00000220966 658 ntBASIC12.82□□□□□ -0.36
Gm340F6RGI3 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.82□□□□□ -0.36
Gm340F6RGI3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.82□□□□□ -0.36
Gm340F6RGI3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.82□□□□□ -0.36
Gm340F6RGI3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Gm340F6RGI3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm12403-201ENSMUST00000121384 959 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 Mir6392-201ENSMUST00000184924 108 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.81□□□□□ -0.36
Gm340F6RGI3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Gm340F6RGI3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm340F6RGI3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm340F6RGI3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm340F6RGI3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.8□□□□□ -0.36
Gm340F6RGI3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm340F6RGI3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm340F6RGI3 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Gm340F6RGI3 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Gm340F6RGI3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Gm340F6RGI3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.8□□□□□ -0.36
Gm340F6RGI3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms