Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Clca3bE9PUL3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Snord83b-201ENSMUST00000104546 94 ntBASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Gm8062-201ENSMUST00000139696 444 ntBASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Gm37042-201ENSMUST00000193816 581 ntBASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.16□□□□□ -0.14
Clca3bE9PUL3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Clca3bE9PUL3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Gm22018-201ENSMUST00000104357 131 ntBASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Gm13392-201ENSMUST00000117708 150 ntBASIC14.15□□□□□ -0.14
Clca3bE9PUL3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clca3bE9PUL3 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Gm6222-202ENSMUST00000182143 629 ntBASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Gm43630-201ENSMUST00000201550 776 ntBASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Gm19163-201ENSMUST00000223313 780 ntBASIC14.14□□□□□ -0.15
Clca3bE9PUL3 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.14□□□□□ -0.15
Clca3bE9PUL3 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms