Protein–RNA interactions for Protein: C0HKE2

Hist1h2ac, Histone H2A type 1-C, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2acC0HKE2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hist1h2acC0HKE2 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Gm14719-201ENSMUST00000121891 340 ntBASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Gm28760-201ENSMUST00000185995 736 ntBASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Gm38144-201ENSMUST00000192790 465 ntBASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Gm43094-201ENSMUST00000196549 921 ntBASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Gm24447-201ENSMUST00000083977 338 ntBASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hist1h2acC0HKE2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hist1h2acC0HKE2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hist1h2acC0HKE2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hist1h2acC0HKE2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Gm24694-201ENSMUST00000180054 110 ntBASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Gm27663-201ENSMUST00000184839 110 ntBASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hist1h2acC0HKE2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Hist1h2acC0HKE2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms