Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Gm9025-201ENSMUST00000122415 1575 ntBASIC17.8■□□□□ 0.44
Tmf1B9EKI3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Gm26185-201ENSMUST00000157692 266 ntBASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Gm37042-201ENSMUST00000193816 581 ntBASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmf1B9EKI3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Grk6-205ENSMUST00000224653 2976 ntBASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Gm11661-201ENSMUST00000121761 1327 ntBASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Gm19163-201ENSMUST00000223313 780 ntBASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.79■□□□□ 0.44
Tmf1B9EKI3 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Gm12363-201ENSMUST00000122250 668 ntBASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Tmf1B9EKI3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmf1B9EKI3 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms